By default, Skyrim is backed up and then Enderal is installed.
After a proper uninstall, Skyrim will be restored.
A parralele operation is not provided.
Skyrim Mods are mostly incompatible with Enderal and vice versa.
Likewise, older mods for Enderal are not always compatible.
We therefore recommend to use no mods or only individually tested.
Alternatively, there is a tool on
SkyrimNexus that allows a parral operation with some knowledge about computers.
Attention, this is only for experienced users.
A German description is available
here.
But there is no official support for it.
Use of this tool is at your own risk.
A backup of your game-directory / installation-folder is before recommended
(...
Steam\SteamApps\common\Skyrim)
and by default, the following folders, e.g. under Windows 7:
C:\Users\
%USERPROFILE%\Documents\My Games\Skyrim
C:\Users\
%USERPROFILE%\AppData\Local\Skyrim
sorry, english is not my language